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On Numerical Characterization of DNA, Proteins, Proteomics Maps and Proteome from their Graphical Representations

On Numerical Characterization of DNA, Proteins, Proteomics Maps and Proteome from their Graphical Representations

This video was recorded at Complex Objects Visualization Workshop, Koper 2005. We will outline calculation of a selection of mathematical invariants that can be extracted from matrices associated with various graphical representations of DNA, Proteins, Proteomics Maps and Proteome. In the case with proteome maps one can construct a zigzag line connecting ordered spots in a map, one may construct the partial order graph, one may construct the cluster graph, one may construct the nearest neighbor graph or the sequential neighbor graph, and one may construct the minimal spanning tree.

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